{
  "_id": "6a10662aacfb0bcc41ca8dbb",
  "Package": "deBif",
  "Type": "Package",
  "Title": "Bifurcation Analysis of Ordinary Differential Equation Systems",
  "Version": "0.1.10",
  "Authors@R": "c(person(\"Andre M.\", \"de Roos\", email = \"A.M.deRoos@uva.nl\", role = c(\"aut\", \"cre\")))",
  "Description": "Shiny application that performs bifurcation and phaseplane\nanalysis of systems of ordinary differential equations. The\npackage allows for computation of equilibrium curves as a\nfunction of a single free parameter, detection of\ntranscritical, saddle-node and hopf bifurcation points along\nthese curves, and computation of curves representing these\ntranscritical, saddle-node and hopf bifurcation points as a\nfunction of two free parameters. The shiny-based GUI allows\nvisualization of the results in both 2D- and 3D-plots. The\nimplemented methods for solution localisation and curve\ncontinuation are based on the book \"Elements of applied\nbifurcation theory\" (Kuznetsov, Y. A., 1995; ISBN:\n0-387-94418-4).",
  "License": "GPL-3",
  "Encoding": "UTF-8",
  "NeedsCompilation": "yes",
  "RoxygenNote": "7.3.2",
  "VignetteBuilder": "R.rsp",
  "Config/pak/sysreqs": "cmake make libuv1-dev zlib1g-dev",
  "Repository": "https://amderoos.r-universe.dev",
  "Date/Publication": "2025-02-21 17:52:29 UTC",
  "RemoteUrl": "https://github.com/amderoos/debif",
  "RemoteRef": "HEAD",
  "RemoteSha": "47e6b5f384da74af10b0c869819f0f0c8f191430",
  "Packaged": {
    "Date": "2026-05-08 06:05:30 UTC",
    "User": "root"
  },
  "Author": "Andre M. de Roos [aut, cre]",
  "Maintainer": "Andre M. de Roos <A.M.deRoos@uva.nl>",
  "MD5sum": "6216ca526d42a2980657174c16e7a9cc",
  "_user": "amderoos",
  "_type": "src",
  "_file": "deBif_0.1.10.tar.gz",
  "_fileid": "5d06b451e7962c8430e3cfe84f75b4d0a594ad7f34356075ff75f1fa6f17f52a",
  "_filesize": 4322470,
  "_sha256": "5d06b451e7962c8430e3cfe84f75b4d0a594ad7f34356075ff75f1fa6f17f52a",
  "_created": "2026-05-08T06:05:30.000Z",
  "_published": "2026-05-22T14:20:26.631Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77398462326,
      "time": 131,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "6872934715"
    },
    {
      "job": 77398462051,
      "time": 144,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "6872938496"
    },
    {
      "job": 77398462580,
      "time": 132,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "6872934813"
    },
    {
      "job": 77398462515,
      "time": 179,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "6872945351"
    },
    {
      "job": 77398463178,
      "time": 83,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "6872925303"
    },
    {
      "job": 77398462476,
      "time": 265,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "6872961464"
    },
    {
      "job": 77398462322,
      "time": 102,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "6872928979"
    },
    {
      "job": 77398462495,
      "time": 210,
      "config": "macos-release-x86_64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "6872950425"
    },
    {
      "job": 77398461842,
      "time": 172,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "6872908245"
    },
    {
      "job": 77398461649,
      "time": 108,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7162778346"
    },
    {
      "job": 77398462575,
      "time": 106,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "6872930047"
    },
    {
      "job": 77398462509,
      "time": 95,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "6872927832"
    },
    {
      "job": 77398462374,
      "time": 106,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "6872929927"
    }
  ],
  "_buildurl": "https://github.com/r-universe/amderoos/actions/runs/25539793779",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/amderoos/debif",
  "_commit": {
    "id": "47e6b5f384da74af10b0c869819f0f0c8f191430",
    "author": "André M. de Roos <A.M.deRoos@uva.nl>",
    "committer": "André M. de Roos <A.M.deRoos@uva.nl>",
    "message": "Changed the placement of the Save plot button\n",
    "time": 1740160349
  },
  "_maintainer": {
    "name": "Andre M. de Roos",
    "email": "a.m.deroos@uva.nl",
    "login": "amderoos",
    "uuid": 8081015
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.2",
      "role": "Depends"
    },
    {
      "package": "graphics",
      "role": "Imports"
    },
    {
      "package": "deSolve",
      "version": ">= 1.3",
      "role": "Imports"
    },
    {
      "package": "rootSolve",
      "version": ">= 1.8",
      "role": "Imports"
    },
    {
      "package": "rstudioapi",
      "version": ">= 0.13",
      "role": "Imports"
    },
    {
      "package": "shiny",
      "version": ">= 1.7",
      "role": "Imports"
    },
    {
      "package": "shinyjs",
      "version": ">= 2.1",
      "role": "Imports"
    },
    {
      "package": "shinydashboard",
      "version": ">= 0.7",
      "role": "Imports"
    },
    {
      "package": "shinydashboardPlus",
      "version": ">= 2.0",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "R.rsp",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "amderoos",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "amderoos",
      "count": 121,
      "uuid": 8081015
    }
  ],
  "_userbio": {
    "uuid": 8081015,
    "type": "user",
    "name": "amderoos"
  },
  "_downloads": {
    "count": 238,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/deBif"
  },
  "_devurl": "https://github.com/amderoos/debif",
  "_searchresults": 6,
  "_topics": [
    "openblas"
  ],
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/deBif.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/amderoos/debif",
  "_realowner": "amderoos",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2022-03-14"
    },
    {
      "version": "0.1.5",
      "date": "2022-04-08"
    },
    {
      "version": "0.1.7",
      "date": "2023-01-18"
    },
    {
      "version": "0.1.8",
      "date": "2023-12-04"
    },
    {
      "version": "0.1.9",
      "date": "2025-02-15"
    }
  ],
  "_exports": [
    "bifurcation",
    "deBifExample",
    "deBifHelp",
    "deBifReset",
    "phaseplane"
  ],
  "_help": [
    {
      "page": "bifurcation",
      "title": "Phaseplane analysis of a system of ODEs",
      "topics": [
        "bifurcation"
      ]
    },
    {
      "page": "deBifExample",
      "title": "Examples of phaseplane analysis of a system of ODEs",
      "topics": [
        "deBifExample"
      ]
    },
    {
      "page": "deBifHelp",
      "title": "Opens the deBif manual",
      "topics": [
        "deBifHelp"
      ]
    },
    {
      "page": "deBifReset",
      "title": "Reloads the deBif package",
      "topics": [
        "deBifReset"
      ]
    },
    {
      "page": "phaseplane",
      "title": "Phaseplane analysis of a system of ODEs",
      "topics": [
        "phaseplane"
      ]
    }
  ],
  "_readme": "https://github.com/amderoos/debif/raw/HEAD/README.md",
  "_rundeps": [
    "base64enc",
    "bslib",
    "cachem",
    "cli",
    "commonmark",
    "deSolve",
    "digest",
    "fastmap",
    "fontawesome",
    "fresh",
    "fs",
    "glue",
    "htmltools",
    "httpuv",
    "jquerylib",
    "jsonlite",
    "later",
    "lifecycle",
    "magrittr",
    "memoise",
    "mime",
    "otel",
    "promises",
    "R6",
    "rappdirs",
    "Rcpp",
    "rlang",
    "rootSolve",
    "rstudioapi",
    "sass",
    "shiny",
    "shinydashboard",
    "shinydashboardPlus",
    "shinyjs",
    "sourcetools",
    "waiter",
    "withr",
    "xtable"
  ],
  "_sysdeps": [
    {
      "shlib": "liblapack",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.26+ds-1ubuntu0.1",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    }
  ],
  "_vignettes": [
    {
      "source": "deBif-manual.pdf.asis",
      "filename": "deBif-manual.pdf",
      "title": "deBif (vignette in pdf format)",
      "engine": "R.rsp::asis",
      "headings": [],
      "created": "2019-12-03 08:17:06",
      "modified": "2019-12-03 08:17:06",
      "commits": 1
    }
  ],
  "_score": 3.6989700043360187,
  "_indexed": true,
  "_nocasepkg": "debif",
  "_universes": [
    "amderoos"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.10",
      "date": "2026-05-08T06:07:37.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "976f70ef0345118b64491327e7a2fdf330d1d3c511ef25fef6748a092b595f50",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/25539793779"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.10",
      "date": "2026-05-08T06:07:50.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "8073f127b9fb0cd41115573d7f381365d5eae45d8cbb0a5ee8e83f4c12abfbe3",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/25539793779"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.10",
      "date": "2026-05-08T06:07:38.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "4720f828d31360d839b8f3a56e1639f25fa0d1bdf54826fb8bee89796add94a5",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/25539793779"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.10",
      "date": "2026-05-08T06:08:25.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "1156fd73707eef34e83c7e87c687ba729614309f63a4e69e60839ca1d4acc2db",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/25539793779"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.10",
      "date": "2026-05-08T06:06:53.000Z",
      "arch": "aarch64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "6df3b8b3fb4931e8a879da2038bf630569ffbf5f0b15a9a6290357413add2ddb",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/25539793779"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.10",
      "date": "2026-05-08T06:09:10.000Z",
      "arch": "x86_64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "27ba94f46afd7f19ff243672ad2e074b5ddaaa3f603366449a1ba93de9d77009",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/25539793779"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.10",
      "date": "2026-05-08T06:07:09.000Z",
      "arch": "aarch64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "f9e99543593311792b059a60cf6b1cddebfab8aaa13bba5d6fad80ede5c17f6d",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/25539793779"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.10",
      "date": "2026-05-08T06:08:25.000Z",
      "arch": "x86_64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "4414aa549a30a896c3875a3c3a014b8a84db3bab0f2f36e15e9fae1178bbeb99",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/25539793779"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.10",
      "date": "2026-05-08T06:06:53.000Z",
      "arch": "x86_64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "8967c99d3de757999605dc2a7afba65a4c0b3e3cbf62c4a11345da51415760cc",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/25539793779"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.10",
      "date": "2026-05-08T06:06:42.000Z",
      "arch": "x86_64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "088d30003c2f99434f99ee58f9966d1cf82b46a814f703410d580a531bbcffea",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/25539793779"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.10",
      "date": "2026-05-08T06:06:55.000Z",
      "arch": "x86_64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "bd7b9c2ca46035f93a350f26e8a86c94015544d30bdc94345e9f36881c536bd2",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/25539793779"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.10",
      "date": "2026-05-22T14:20:07.000Z",
      "arch": "emscripten",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "e452d550d46a5bf65b40d97d355706f1e2c588c220554538268e907182068e14",
      "status": "success",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/25539793779"
    }
  ]
}