{
  "_id": "6a4cc07607c3fd5c3261047f",
  "Package": "deBif",
  "Type": "Package",
  "Title": "Bifurcation Analysis of Ordinary Differential Equation Systems",
  "Version": "0.1.10",
  "Authors@R": "c(person(\"Andre M.\", \"de Roos\", email = \"A.M.deRoos@uva.nl\", role = c(\"aut\", \"cre\")))",
  "Description": "Shiny application that performs bifurcation and phaseplane\nanalysis of systems of ordinary differential equations. The\npackage allows for computation of equilibrium curves as a\nfunction of a single free parameter, detection of\ntranscritical, saddle-node and hopf bifurcation points along\nthese curves, and computation of curves representing these\ntranscritical, saddle-node and hopf bifurcation points as a\nfunction of two free parameters. The shiny-based GUI allows\nvisualization of the results in both 2D- and 3D-plots. The\nimplemented methods for solution localisation and curve\ncontinuation are based on the book \"Elements of applied\nbifurcation theory\" (Kuznetsov, Y. A., 1995; ISBN:\n0-387-94418-4).",
  "License": "GPL-3",
  "Encoding": "UTF-8",
  "NeedsCompilation": "yes",
  "RoxygenNote": "7.3.2",
  "VignetteBuilder": "R.rsp",
  "Config/pak/sysreqs": "cmake make libuv1-dev zlib1g-dev",
  "Repository": "https://amderoos.r-universe.dev",
  "Date/Publication": "2025-02-21 17:52:29 UTC",
  "RemoteUrl": "https://github.com/amderoos/debif",
  "RemoteRef": "HEAD",
  "RemoteSha": "47e6b5f384da74af10b0c869819f0f0c8f191430",
  "Packaged": {
    "Date": "2026-07-07 08:56:16 UTC",
    "User": "root"
  },
  "Author": "Andre M. de Roos [aut, cre]",
  "Maintainer": "Andre M. de Roos <A.M.deRoos@uva.nl>",
  "_user": "amderoos",
  "_type": "src",
  "_file": "deBif_0.1.10.tar.gz",
  "_fileid": "https://r2.ropensci.org/19dd5d724e28bd7edaedadc0771483e9eb29a8ef9c04a8fc3d0ce730df2e6616",
  "_filesize": 4322648,
  "_sha256": "19dd5d724e28bd7edaedadc0771483e9eb29a8ef9c04a8fc3d0ce730df2e6616",
  "_expires": "2026-10-15T09:01:40.000Z",
  "_created": "2026-07-07T08:56:16.000Z",
  "_published": "2026-07-07T09:01:42.404Z",
  "_jobs": [
    {
      "job": 85576285736,
      "time": 143,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "8132883071"
    },
    {
      "job": 85576285746,
      "time": 140,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "8132881139"
    },
    {
      "job": 85576285754,
      "time": 145,
      "config": "linux-release-arm64",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "8132883757"
    },
    {
      "job": 85576285805,
      "time": 151,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "8132885305"
    },
    {
      "job": 85576285768,
      "time": 123,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "8132874315"
    },
    {
      "job": 85576285792,
      "time": 156,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "8132886905"
    },
    {
      "job": 85576285729,
      "time": 158,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "8132887076"
    },
    {
      "job": 85576285726,
      "time": 282,
      "config": "macos-release-x86_64",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "8132934023"
    },
    {
      "job": 85575750958,
      "time": 171,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8132827208"
    },
    {
      "job": 85576285703,
      "time": 138,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8132880727"
    },
    {
      "job": 85576285748,
      "time": 96,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "8132864181"
    },
    {
      "job": 85576285799,
      "time": 102,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "8132866295"
    },
    {
      "job": 85576285882,
      "time": 101,
      "config": "windows-release",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "8132866210"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/amderoos/actions/runs/28853925249",
  "_status": "success",
  "_upstream": "https://github.com/amderoos/debif",
  "_commit": {
    "id": "47e6b5f384da74af10b0c869819f0f0c8f191430",
    "author": "André M. de Roos <A.M.deRoos@uva.nl>",
    "committer": "André M. de Roos <A.M.deRoos@uva.nl>",
    "message": "Changed the placement of the Save plot button\n",
    "time": 1740160349
  },
  "_maintainer": {
    "name": "Andre M. de Roos",
    "email": "a.m.deroos@uva.nl",
    "login": "amderoos",
    "description": "",
    "uuid": 8081015
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.2",
      "role": "Depends"
    },
    {
      "package": "graphics",
      "role": "Imports"
    },
    {
      "package": "deSolve",
      "version": ">= 1.3",
      "role": "Imports"
    },
    {
      "package": "rootSolve",
      "version": ">= 1.8",
      "role": "Imports"
    },
    {
      "package": "rstudioapi",
      "version": ">= 0.13",
      "role": "Imports"
    },
    {
      "package": "shiny",
      "version": ">= 1.7",
      "role": "Imports"
    },
    {
      "package": "shinyjs",
      "version": ">= 2.1",
      "role": "Imports"
    },
    {
      "package": "shinydashboard",
      "version": ">= 0.7",
      "role": "Imports"
    },
    {
      "package": "shinydashboardPlus",
      "version": ">= 2.0",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "R.rsp",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "amderoos",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "amderoos",
      "count": 121,
      "uuid": 8081015
    }
  ],
  "_userbio": {
    "uuid": 8081015,
    "type": "user",
    "name": "amderoos",
    "followers": 2
  },
  "_downloads": {
    "count": 372,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/deBif"
  },
  "_devurl": "https://github.com/amderoos/debif",
  "_searchresults": 6,
  "_topics": [
    "openblas"
  ],
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/deBif.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/amderoos/debif",
  "_realowner": "amderoos",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2022-03-14"
    },
    {
      "version": "0.1.5",
      "date": "2022-04-08"
    },
    {
      "version": "0.1.7",
      "date": "2023-01-18"
    },
    {
      "version": "0.1.8",
      "date": "2023-12-04"
    },
    {
      "version": "0.1.9",
      "date": "2025-02-15"
    }
  ],
  "_exports": [
    "bifurcation",
    "deBifExample",
    "deBifHelp",
    "deBifReset",
    "phaseplane"
  ],
  "_help": [
    {
      "page": "bifurcation",
      "title": "Phaseplane analysis of a system of ODEs",
      "topics": [
        "bifurcation"
      ]
    },
    {
      "page": "deBifExample",
      "title": "Examples of phaseplane analysis of a system of ODEs",
      "topics": [
        "deBifExample"
      ]
    },
    {
      "page": "deBifHelp",
      "title": "Opens the deBif manual",
      "topics": [
        "deBifHelp"
      ]
    },
    {
      "page": "deBifReset",
      "title": "Reloads the deBif package",
      "topics": [
        "deBifReset"
      ]
    },
    {
      "page": "phaseplane",
      "title": "Phaseplane analysis of a system of ODEs",
      "topics": [
        "phaseplane"
      ]
    }
  ],
  "_readme": "https://github.com/amderoos/debif/raw/HEAD/README.md",
  "_rundeps": [
    "base64enc",
    "bslib",
    "cachem",
    "cli",
    "commonmark",
    "deSolve",
    "digest",
    "fastmap",
    "fontawesome",
    "fresh",
    "fs",
    "glue",
    "htmltools",
    "httpuv",
    "jquerylib",
    "jsonlite",
    "later",
    "lifecycle",
    "magrittr",
    "memoise",
    "mime",
    "otel",
    "promises",
    "R6",
    "rappdirs",
    "Rcpp",
    "rlang",
    "rootSolve",
    "rstudioapi",
    "sass",
    "shiny",
    "shinydashboard",
    "shinydashboardPlus",
    "shinyjs",
    "sourcetools",
    "waiter",
    "withr",
    "xtable"
  ],
  "_sysdeps": [
    {
      "shlib": "liblapack",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.32+ds-5",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    }
  ],
  "_vignettes": [
    {
      "source": "deBif-manual.pdf.asis",
      "filename": "deBif-manual.pdf",
      "title": "deBif (vignette in pdf format)",
      "engine": "R.rsp::asis",
      "headings": [
        "Preface",
        "Model implementation",
        "The phaseplane() application",
        "The bifurcation() application"
      ],
      "created": "2019-12-03 08:17:06",
      "modified": "2019-12-03 08:17:06",
      "commits": 1
    }
  ],
  "_score": 3.6989700043360187,
  "_indexed": true,
  "_nocasepkg": "debif",
  "_universes": [
    "amderoos"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.10",
      "date": "2026-07-07T08:58:41.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "https://r2.ropensci.org/264104be32bec3af5c616676cd870d15d77b74fdf46999f6ca6ba65d03672d3d",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/28853925249"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.10",
      "date": "2026-07-07T08:58:27.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "https://r2.ropensci.org/50396d99d48d1462730cec722bffcafefcc21e95374a875e23ae5b98d035b43e",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/28853925249"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.1.10",
      "date": "2026-07-07T08:58:40.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "https://r2.ropensci.org/1bc2180c303600bfdfbe92a7a446d91eba73ab5a1aab593b4f41ba82b590ec90",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/28853925249"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.1.10",
      "date": "2026-07-07T08:58:40.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "https://r2.ropensci.org/58518ad5e351fc68c29d8913499882bb9c9cdd4d04b346c53879adcd19419d0b",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/28853925249"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.10",
      "date": "2026-07-07T08:58:09.000Z",
      "arch": "aarch64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "https://r2.ropensci.org/0ed52b774fecfa2497448cab5040be096d1da7e05c5558a17110c3a709e1fd21",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/28853925249"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.10",
      "date": "2026-07-07T08:58:33.000Z",
      "arch": "x86_64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "https://r2.ropensci.org/dc0b6471dffac0575e29d365722ab7ab89faf222022331c7c6bae4c67e768591",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/28853925249"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.1.10",
      "date": "2026-07-07T08:58:35.000Z",
      "arch": "aarch64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "https://r2.ropensci.org/4144f4de26452e3a74e458d19c0209743347bfa6a84d3231f8ac7978d2e6d7fc",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/28853925249"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.1.10",
      "date": "2026-07-07T09:00:08.000Z",
      "arch": "x86_64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "https://r2.ropensci.org/71fd8d7bfc4256af913e7bc1c80680ccca1ebca170e096d5b3b0abeec94cdea8",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/28853925249"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.10",
      "date": "2026-07-07T08:58:53.000Z",
      "arch": "emscripten",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "https://r2.ropensci.org/a765c32c8de4f4a9a63df0d364e5661f28737df8d9a8d85ff99adb03487b1bf9",
      "status": "success",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/28853925249"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.10",
      "date": "2026-07-07T08:57:28.000Z",
      "arch": "x86_64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "https://r2.ropensci.org/10bc7f8b1f8de58acdda0c6a415c074831801bf7e56f1cfdaebf0b8aa5f7e205",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/28853925249"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.10",
      "date": "2026-07-07T08:57:34.000Z",
      "arch": "x86_64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "https://r2.ropensci.org/35f5463f14a370f5dc86f1f8f84a666c52ced4ee27678f8a1a410ceecff1d7d7",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/28853925249"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.1.10",
      "date": "2026-07-07T08:57:36.000Z",
      "arch": "x86_64",
      "commit": "47e6b5f384da74af10b0c869819f0f0c8f191430",
      "fileid": "https://r2.ropensci.org/dec171ffb09aa529aad887d8a6ceed4405becbbb77841200541175d7f27f8116",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/amderoos/actions/runs/28853925249"
    }
  ]
}